The NEXUS sub-command#

usage: pycgm2.exe NEXUS [-h]
                        {CGM1.0,CGM1.1,CGM2.1,CGM2.2,CGM2.3,CGM2.4,CGM2.5,CGM2.6,Events,Gaps,Plots,System}
                        ...

Positional Arguments#

NEXUS: Possible choices: CGM1.0, CGM1.1, CGM2.1, CGM2.2, CGM2.3, CGM2.4, CGM2.5, CGM2.6, Events, Gaps, Plots, System

Sub-commands#

CGM1.0#

CGM1.0 commands

pycgm2.exe NEXUS CGM1.0 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM10: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM1.0

pycgm2.exe NEXUS CGM1.0 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM10 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

Fitting#

Fitting command of the CGM1.0

pycgm2.exe NEXUS CGM1.0 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM10 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : Distal, Proximal or Global

CGM1.1#

CGM1.1 commands

pycgm2.exe NEXUS CGM1.1 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM11: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM1.1

pycgm2.exe NEXUS CGM1.1 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM11 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

Fitting#

Fitting command of the CGM1.1

pycgm2.exe NEXUS CGM1.1 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM11 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : JCS, Distal, Proximal or Global

CGM2.1#

CGM2.1 commands

pycgm2.exe NEXUS CGM2.1 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM21: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM2.1

pycgm2.exe NEXUS CGM2.1 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]
                                    [--forceLHJC FORCELHJC [FORCELHJC ...]]
                                    [--forceRHJC FORCERHJC [FORCERHJC ...]]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM21 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

--forceLHJC

--forceRHJC

Fitting#

Fitting command of the CGM2.1

pycgm2.exe NEXUS CGM2.1 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM21 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : JCS, Distal, Proximal or Global

CGM2.2#

CGM2.2 commands

pycgm2.exe NEXUS CGM2.2 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM22: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM2.2

pycgm2.exe NEXUS CGM2.2 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]
                                    [--forceLHJC FORCELHJC [FORCELHJC ...]]
                                    [--forceRHJC FORCERHJC [FORCERHJC ...]]
                                    [-msm]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM22 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

--forceLHJC

--forceRHJC

-msm, --musculoSkeletalModel

musculoskeletal model

Default: False

Fitting#

Fitting command of the CGM2.2

pycgm2.exe NEXUS CGM2.2 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ] [-msm] [-a ACCURACY] [--noIk]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM22 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : JCS, Distal, Proximal or Global

-msm, --musculoSkeletalModel

musculoskeletal model

Default: False

-a, --accuracy

Inverse Kinematics accuracy

--noIk

cancel inverse kinematic

Default: False

CGM2.3#

CGM2.3 commands

pycgm2.exe NEXUS CGM2.3 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM23: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM2.3

pycgm2.exe NEXUS CGM2.3 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]
                                    [--forceLHJC FORCELHJC [FORCELHJC ...]]
                                    [--forceRHJC FORCERHJC [FORCERHJC ...]]
                                    [-msm] [--noIk]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM23 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

--forceLHJC

--forceRHJC

-msm, --musculoSkeletalModel

musculoskeletal model

Default: False

--noIk

cancel inverse kinematic

Default: False

Fitting#

Fitting command of the CGM2.3

pycgm2.exe NEXUS CGM2.3 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ] [-msm] [-a ACCURACY] [--noIk]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM23 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : JCS, Distal, Proximal or Global

-msm, --musculoSkeletalModel

musculoskeletal model

Default: False

-a, --accuracy

Inverse Kinematics accuracy

--noIk

cancel inverse kinematic

Default: False

CGM2.4#

CGM2.4 commands

pycgm2.exe NEXUS CGM2.4 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM24: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM2.4

pycgm2.exe NEXUS CGM2.4 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]
                                    [--forceLHJC FORCELHJC [FORCELHJC ...]]
                                    [--forceRHJC FORCERHJC [FORCERHJC ...]]
                                    [--noIk]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM24 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

--forceLHJC

--forceRHJC

--noIk

cancel inverse kinematic

Default: False

Fitting#

Fitting command of the CGM2.4

pycgm2.exe NEXUS CGM2.4 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ] [-a ACCURACY] [--noIk]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM24 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : JCS, Distal, Proximal or Global

-a, --accuracy

Inverse Kinematics accuracy

--noIk

cancel inverse kinematic

Default: False

CGM2.5#

CGM2.5 commands

pycgm2.exe NEXUS CGM2.5 [-h] {Calibration,Fitting} ...

Positional Arguments#

CGM25: Possible choices: Calibration, Fitting

Sub-commands#

Calibration#

Calibration command of the CGM2.5

pycgm2.exe NEXUS CGM2.5 Calibration [-h] [-l LEFTFLATFOOT] [-r RIGHTFLATFOOT]
                                    [-hf HEADFLAT] [-md MARKERDIAMETER]
                                    [-ps POINTSUFFIX] [--check] [--resetMP]
                                    [--forceMP] [-ae]
                                    [--offline OFFLINE OFFLINE]
                                    [--forceLHJC FORCELHJC [FORCELHJC ...]]
                                    [--forceRHJC FORCERHJC [FORCERHJC ...]]
                                    [--noIk]

Named Arguments#

-l, --leftFlatFoot

left flat foot option

-r, --rightFlatFoot

right flat foot option

-hf, --headFlat

head flat option

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of the model outputs

--check

force CGM25 as model ouput suffix

Default: False

--resetMP

reset optional anthropometric parameters

Default: False

--forceMP

force the use of MP offsets to compute knee and ankle joint centres

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

--offline

subject name and static c3d file

--forceLHJC

--forceRHJC

--noIk

cancel inverse kinematic

Default: False

Fitting#

Fitting command of the CGM2.5

pycgm2.exe NEXUS CGM2.5 Fitting [-h] [-md MARKERDIAMETER] [-ps POINTSUFFIX]
                                [--check] [-ae] [-fi FRAMEINIT] [-fe FRAMEEND]
                                [--offline OFFLINE OFFLINE OFFLINE] [-c3d C3D]
                                [--proj PROJ] [-a ACCURACY] [--noIk]

Named Arguments#

-md, --markerDiameter

marker diameter

-ps, --pointSuffix

suffix of model outputs

--check

force CGM25 as model ouput suffix

Default: False

-ae, --anomalyException

raise an exception if an anomaly is detected

Default: False

-fi, --frameInit

first frame to process

-fe, --frameEnd

last frame to process

--offline

subject name - dynamic c3d file - mfpa

-c3d, --c3d

load the c3d file. This operation avoid to load data from the Nexus API. (be sure you save the c3d beforehand )

--proj

Referential to project joint moment. Choice : JCS, Distal, Proximal or Global

-a, --accuracy

Inverse Kinematics accuracy

--noIk

cancel inverse kinematic

Default: False

CGM2.6#

CGM2.6 commands

pycgm2.exe NEXUS CGM2.6 [-h] {2DOF,SARA} ...

Positional Arguments#

CGM26: Possible choices: 2DOF, SARA

Sub-commands#

2DOF#

2DOF knee functional calibration

pycgm2.exe NEXUS CGM2.6 2DOF [-h] [-s SIDE] [-fi FRAMEINIT] [-fe FRAMEEND]

Named Arguments#

-s, --side: Side : Left or Right
-fi, --frameInit: first frame to process
-fe, --frameEnd: last frame to process

SARA#

SARA knee functional calibration

pycgm2.exe NEXUS CGM2.6 SARA [-h] [-s SIDE] [-fi FRAMEINIT] [-fe FRAMEEND]

Named Arguments#

-s, --side: Side : Left or Right
-fi, --frameInit: first frame to process
-fe, --frameEnd: last frame to process

Events#

events commands

pycgm2.exe NEXUS Events [-h] {Zeni} ...

Positional Arguments#

Events: Possible choices: Zeni

Sub-commands#

Zeni#

zeni kinematic-based event detection

pycgm2.exe NEXUS Events Zeni [-h] [-fso FOOTSTRIKEOFFSET] [-foo FOOTOFFOFFSET]

Named Arguments#

-fso, --footStrikeOffset: systenatic foot strike offset on both side
-foo, --footOffOffset: systenatic foot off offset on both side

Gaps#

Gap filling commands

pycgm2.exe NEXUS Gaps [-h] {Kalman,Gloersen} ...

Positional Arguments#

Gaps: Possible choices: Kalman, Gloersen

Sub-commands#

Kalman#

kalman gap filling

pycgm2.exe NEXUS Gaps Kalman [-h] [--markers [MARKERS ...]]

Named Arguments#

--markers: list of markers

Gloersen#

Gloersen gap filling

pycgm2.exe NEXUS Gaps Gloersen [-h] [--markers [MARKERS ...]]

Named Arguments#

--markers: list of markers

Plots#

Plot commands

pycgm2.exe NEXUS Plots [-h] {STP,Kinematics,Kinetics,Reaction,EMG} ...

Positional Arguments#

Plots: Possible choices: STP, Kinematics, Kinetics, Reaction, EMG

Sub-commands#

STP#

SpatiotemporalParameters plots

pycgm2.exe NEXUS Plots STP [-h] [-ps POINTSUFFIX]

Named Arguments#

-ps, --pointSuffix: suffix added to model outputs

Kinematics#

Kinematics plots

pycgm2.exe NEXUS Plots Kinematics [-h]
                                  {Temporal,Normalized,Comparison,MAP} ...

Positional Arguments#

Kinematics

Possible choices: Temporal, Normalized, Comparison, MAP

kinematics plots sub-commands

Sub-commands#

Temporal#

temporal plot

pycgm2.exe NEXUS Plots Kinematics Temporal [-h] [-ps POINTSUFFIX]

Named Arguments#

-ps, --pointSuffix: suffix of model outputs

Normalized#

time-normalized

pycgm2.exe NEXUS Plots Kinematics Normalized [-h] [-nd NORMATIVEDATA]
                                             [-ndm NORMATIVEDATAMODALITY]
                                             [-ps POINTSUFFIX] [-c]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,Slow,Free,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

-c, --consistency

consistency plots

Default: False

Comparison#

time-normalized comparison

pycgm2.exe NEXUS Plots Kinematics Comparison [-h] [-nd NORMATIVEDATA]
                                             [-ndm NORMATIVEDATAMODALITY]
                                             [-ps POINTSUFFIX] [-c]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,SlowFree,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

-c, --consistency

consistency plots

Default: False

MAP#

Mouvement analysis profile

pycgm2.exe NEXUS Plots Kinematics MAP [-h] [-nd NORMATIVEDATA]
                                      [-ndm NORMATIVEDATAMODALITY]
                                      [-ps POINTSUFFIX]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,Slow,Free,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

Kinetics#

kinetics plots

pycgm2.exe NEXUS Plots Kinetics [-h] {Temporal,Normalized,Comparison} ...

Positional Arguments#

Kinetics

Possible choices: Temporal, Normalized, Comparison

kinetics plots sub-commands

Sub-commands#

Temporal#

temporal plot

pycgm2.exe NEXUS Plots Kinetics Temporal [-h] [-ps POINTSUFFIX]

Named Arguments#

-ps, --pointSuffix: suffix of model outputs

Normalized#

time-normalized

pycgm2.exe NEXUS Plots Kinetics Normalized [-h] [-nd NORMATIVEDATA]
                                           [-ndm NORMATIVEDATAMODALITY]
                                           [-ps POINTSUFFIX] [-c]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,SlowFree,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

-c, --consistency

consistency plots

Default: False

Comparison#

time-normalized comparison

pycgm2.exe NEXUS Plots Kinetics Comparison [-h] [-nd NORMATIVEDATA]
                                           [-ndm NORMATIVEDATAMODALITY]
                                           [-ps POINTSUFFIX] [-c]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,SlowFree,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

-c, --consistency

consistency plots

Default: False

Reaction#

reaction plots

pycgm2.exe NEXUS Plots Reaction [-h] {Temporal,Normalized,Comparison} ...

Positional Arguments#

Reaction

Possible choices: Temporal, Normalized, Comparison

Reaction plots sub-commands

Sub-commands#

Temporal#

temporal plot

pycgm2.exe NEXUS Plots Reaction Temporal [-h] [-ps POINTSUFFIX]

Named Arguments#

-ps, --pointSuffix: suffix of model outputs

Normalized#

time-normalized

pycgm2.exe NEXUS Plots Reaction Normalized [-h] [-nd NORMATIVEDATA]
                                           [-ndm NORMATIVEDATAMODALITY]
                                           [-ps POINTSUFFIX] [-c]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,SlowFree,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

-c, --consistency

consistency plots

Default: False

Comparison#

time-normalized comparison

pycgm2.exe NEXUS Plots Reaction Comparison [-h] [-nd NORMATIVEDATA]
                                           [-ndm NORMATIVEDATAMODALITY]
                                           [-ps POINTSUFFIX] [-c]

Named Arguments#

-nd, --normativeData

normative Data set (Schwartz2008 or Pinzone2014)

Default: “Schwartz2008”

-ndm, --normativeDataModality

if Schwartz2008 [VerySlow,SlowFree,Fast,VeryFast] - if Pinzone2014 [CentreOne,CentreTwo]

Default: “Free”

-ps, --pointSuffix

suffix of model outputs

-c, --consistency

consistency plots

Default: False

EMG#

EMG plots

pycgm2.exe NEXUS Plots EMG [-h] {Temporal,Normalized,Comparison} ...

Positional Arguments#

EMG

Possible choices: Temporal, Normalized, Comparison

Emg plots sub-commands

Sub-commands#

Temporal#

temporal plot

pycgm2.exe NEXUS Plots EMG Temporal [-h]
                                    [-bpf BANDPASSFREQUENCIES [BANDPASSFREQUENCIES ...]]
                                    [-elf ENVELOPLOWPASSFREQUENCY] [-r] [-ina]

Named Arguments#

-bpf, --BandpassFrequencies

bandpass filter

-elf, --EnvelopLowpassFrequency

cutoff frequency for emg envelops

-r, --raw

non rectified data

Default: False

-ina, --ignoreNormalActivity

do not display normal activity

Default: False

Normalized#

time-normalized

pycgm2.exe NEXUS Plots EMG Normalized [-h]
                                      [-bpf BANDPASSFREQUENCIES [BANDPASSFREQUENCIES ...]]
                                      [-elf ENVELOPLOWPASSFREQUENCY] [-c]

Named Arguments#

-bpf, --BandpassFrequencies

bandpass filter

-elf, --EnvelopLowpassFrequency

cutoff frequency for emg envelops

-c, --consistency

consistency plots

Default: False

Comparison#

time-normalized comparison

pycgm2.exe NEXUS Plots EMG Comparison [-h]
                                      [-bpf BANDPASSFREQUENCIES [BANDPASSFREQUENCIES ...]]
                                      [-elf ENVELOPLOWPASSFREQUENCY] [-c]

Named Arguments#

-bpf, --BandpassFrequencies

bandpass filter

-elf, --EnvelopLowpassFrequency

cutoff frequency for emg envelops

-c, --consistency

consistency plots

Default: False

System#

Nexus system commands

pycgm2.exe NEXUS System [-h] {DeviceDetails} ...

Positional Arguments#

System: Possible choices: DeviceDetails

Sub-commands#

DeviceDetails#

command to get device details

pycgm2.exe NEXUS System DeviceDetails [-h]